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MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis Chu, Vu T; Gottardo, Raphael; Raftery, Adrian E; Bumgarner, Roger E; Yeung, Ka Y

Abstract

We present MeV+R, an integration of the JAVA MultiExperiment Viewer program with Bioconductor packages. This integration of MultiExperiment Viewer and R is easily extensible to other R packages and provides users with point and click access to traditionally command line driven tools written in R. We demonstrate the ability to use MultiExperiment Viewer as a graphical user interface for Bioconductor applications in microarray data analysis by incorporating three Bioconductor packages, RAMA, BRIDGE and iterativeBMA.

Item Metadata

Title
MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis
Creator
Chu, Vu T; Gottardo, Raphael; Raftery, Adrian E; Bumgarner, Roger E; Yeung, Ka Y
Publisher
BioMed Central
Date Issued
2008-07-24
Description
We present MeV+R, an integration of the JAVA MultiExperiment Viewer program with Bioconductor packages. This integration of MultiExperiment Viewer and R is easily extensible to other R packages and provides users with point and click access to traditionally command line driven tools written in R. We demonstrate the ability to use MultiExperiment Viewer as a graphical user interface for Bioconductor applications in microarray data analysis by incorporating three Bioconductor packages, RAMA, BRIDGE and iterativeBMA.
Genre
Article
Type
Text
Language
eng
Date Available
2015-10-22
Provider
Vancouver : University of British Columbia Library
Rights
Attribution 4.0 International (CC BY 4.0)
DOI
10.14288/1.0132650
URI
http://hdl.handle.net/2429/55047
Affiliation
Science, Faculty of; Statistics, Department of; Non UBC
Citation
Genome Biology. 2008 Jul 24;9(7):R118
Publisher DOI
10.1186/gb-2008-9-7-r118
Peer Review Status
Reviewed
Scholarly Level
Faculty
Copyright Holder
Chu et al..
Rights URI
http://creativecommons.org/licenses/by/4.0/
Aggregated Source Repository
DSpace

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Rights

Attribution 4.0 International (CC BY 4.0)