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Development of inhibitors of alternative splicing events crucial to HIV-1 replication : a new anti-HIV/AIDS strategy targeting the host cell machinery Bandy, Laura Elizabeth
Abstract
Introduction : HIV infects over 35 million people worldwide . Since the introduction of HAART the survival rate for HIV/AIDS patien ts has increased exponentially. HAART, although effective , does have long term limitations resulting from cross resistance to c ertain drugs of the same class , compliance, and side effects ; therefore , investigating alternative avenues and targets for therapeutic treatment is vital . Through compound library screening, IDC16, a tetracyclic indole compound , has been identified as an inhibitor of SR protein splicing factor 1 ( SRSF1). This protein play s a redundant role in human splicing but is specifically used in HIV - 1 infected cell alternative splicing. Blocking HIV - 1 alternative splicing through inhibitio n of SRSF1 function may establish a novel strategy for HIV/AIDS therapy and is advantageous because it (i) targets a protein that is essential to HIV replication, (ii) targets a huma n protein potentially eliminating the chances of mutation and subsequent r esistance to drug therapy . Although IDC16 displays cytotoxicity, the design of mimics of IDC16 could allow for the discovery of an equally or more potent compound w hich eliminates the cytotoxic effects. Hypothesis : The synthesis of appropriately functionalized and conformation ally mobile ring opened mimics of IDC16 will lead to the identification of new HIV replication inhibitors that : target SRSF1 ; are not cytotoxic ; do not intercalate DNA ; and retain similar or superior anti - HIV activity when compared to IDC16 . Objectives : The synthesi s and evaluation of the anti - HIV activity of a library of IDC16 mimics corresponding to different structural types from a common 2 - pyridinone scaffold: 1 ) bisheterocyclic amides, 2 ) bisheterocyclic oxadiazoles, 3 ) fused bishet erocyclic isoxazolidin - 7 - ones , 4 ) fused bisheterocyclic 5 - arylpyrazolidin - 7 - ones and 5 ) C - 4 (hetero)aryl substituted 2 - pyridinones . Results: Our effort to synthesize inhibitors of HIV - 1 by creating a library of IDC16 mimics led to the discovery of DGPS39/LB - 45 . This compound was 90% as effective as the HAART drug AZT in blocking HIV - 1 replication. Significance : Creating a non - cytotoxic IDC16 mi mic with the same or greater affinity for the target protein SRSF1 will allow for further investigation int o a novel treatment of HIV/AIDS ; which has the potential to circumvent the problems with viral resistance experienced with HAART.
Item Metadata
Title |
Development of inhibitors of alternative splicing events crucial to HIV-1 replication : a new anti-HIV/AIDS strategy targeting the host cell machinery
|
Creator | |
Publisher |
University of British Columbia
|
Date Issued |
2012
|
Description |
Introduction
: HIV infects over 35 million people worldwide
.
Since the introduction of HAART
the survival rate for HIV/AIDS patien
ts has increased exponentially.
HAART, although
effective
,
does have
long term limitations resulting from
cross resistance
to c
ertain drugs of the
same class
, compliance, and side effects
;
therefore
, investigating alternative avenues and targets
for therapeutic treatment is
vital
.
Through compound library screening, IDC16, a tetracyclic
indole compound
, has been identified as an inhibitor of
SR protein splicing factor 1
(
SRSF1).
This
protein
play
s a
redundant role in
human splicing but
is
specifically used in HIV
-
1 infected
cell
alternative
splicing.
Blocking HIV
-
1 alternative splicing through inhibitio
n of SRSF1
function
may establish
a novel strategy
for HIV/AIDS therapy
and
is advantageous because it
(i)
targets
a protein that is essential to HIV replication,
(ii) targets
a huma
n protein potentially
eliminating
the chances of mutation and subsequent r
esistance to drug therapy
.
Although
IDC16
displays cytotoxicity,
the design of mimics
of IDC16 could allow for the discovery of an equally
or more potent compound w
hich eliminates
the cytotoxic effects.
Hypothesis
:
The synthesis of appropriately
functionalized and conformation
ally mobile ring
opened mimics
of IDC16 will lead to the identification of new HIV replication inhibitors that
:
target
SRSF1
;
are not cytotoxic
;
do not intercalate DNA
; and
retain similar or superior anti
-
HIV
activity when
compared to IDC16
.
Objectives
:
The synthesi
s
and evaluation of the anti
-
HIV
activity of
a library of
IDC16 mimics
corresponding to different structural types from a common 2
-
pyridinone scaffold:
1
)
bisheterocyclic amides,
2
) bisheterocyclic oxadiazoles,
3
)
fused bishet
erocyclic isoxazolidin
-
7
-
ones
,
4
) fused bisheterocyclic
5
-
arylpyrazolidin
-
7
-
ones
and
5
) C
-
4 (hetero)aryl substituted 2
-
pyridinones
.
Results:
Our effort to synthesize inhibitors of HIV
-
1 by creating a library of IDC16 mimics led to the discovery of
DGPS39/LB
-
45
. This compound was 90% as effective as the HAART drug
AZT in blocking HIV
-
1 replication.
Significance
:
Creating a non
-
cytotoxic
IDC16 mi
mic
with the same or greater affinity for the
target protein SRSF1
will allow for further investigation int
o a novel treatment of HIV/AIDS
;
which has the potential to circumvent the problems with viral resistance experienced with
HAART.
|
Genre | |
Type | |
Language |
eng
|
Date Available |
2014-04-30
|
Provider |
Vancouver : University of British Columbia Library
|
Rights |
Attribution-NonCommercial-NoDerivs 3.0 Unported
|
DOI |
10.14288/1.0072683
|
URI | |
Degree | |
Program | |
Affiliation | |
Degree Grantor |
University of British Columbia
|
Graduation Date |
2012-05
|
Campus | |
Scholarly Level |
Graduate
|
Rights URI | |
Aggregated Source Repository |
DSpace
|
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Rights
Attribution-NonCommercial-NoDerivs 3.0 Unported