Open Collections

UBC Research Data

Phylogenomic tree of Cercozoa based on single-cell transcriptomes from over 100 uncultured cells Lax, Gordon; Cooney, Elizabeth; Zlatogursky, Vasily; Mtawali, Mahara; Okamoto, Noriko; Jacko-Reynolds, Victoria K.L.; Bjornson, Saelin; Holt, Corey; Hurdeal, Vedprakash G.; Giannotti, Daniele; Keeling, Patrick J.

Description

Supplementary Data for "Phylogenomic tree of Cercozoa based on single-cell transcriptomes from 100 uncultured cells". This includes single-cell transcriptome data of 118 Cercozoa and Rhizaria cells, for the purposes of multigene-analyses (phylogenomics). The dataset includes transcriptome assemblies, predicted peptide sequences, image and video data, SSU rDNA alignment and tree data, multigene alignment and tree data.

Item Metadata

Title
Phylogenomic tree of Cercozoa based on single-cell transcriptomes from over 100 uncultured cells
Creator
Lax, Gordon; Cooney, Elizabeth; Zlatogursky, Vasily; Mtawali, Mahara; Okamoto, Noriko; Jacko-Reynolds, Victoria K.L.; Bjornson, Saelin; Holt, Corey; Hurdeal, Vedprakash G.; Giannotti, Daniele; Keeling, Patrick J.
Contributor
Lax, Gordon
Date Issued
2025-09-09
Description
Supplementary Data for "Phylogenomic tree of Cercozoa based on single-cell transcriptomes from 100 uncultured cells". This includes single-cell transcriptome data of 118 Cercozoa and Rhizaria cells, for the purposes of multigene-analyses (phylogenomics). The dataset includes transcriptome assemblies, predicted peptide sequences, image and video data, SSU rDNA alignment and tree data, multigene alignment and tree data.
Subject
Medicine, Health and Life Sciences; Rhizaria; diversity; multigene phylogeny; phylogenetics; protist; microbial eukaryotes
Geographic Location
Quadra Island; British Columbia; Galiano Island; British Columbia; Vancouver; University of British Columbia; British Columbia; Vancouver; Vanier Park; British Columbia; Vancouver; Queen Elizabeth Park; British Columbia; Richmond; No. 3 Bark Park; British Columbia; Centennial Beach; Boundary Bay; British Columbia; Ogden Point; Victoria; British Columbia; Powell River; British Columbia; Alaska; Gulf of Alaska; Seward; Alaska; CARMABI reef; Tugboat diving site; Water Factory diving site; Boka Sint Michiel; Playa Kanoa
Type
Dataset
Notes
Currently under review
Date Available
2025-09-04
Provider
University of British Columbia Library
License
CC-BY 4.0
DOI
10.14288/1.0450078
URI
https://doi.org/10.5683/SP3/PW1ZZP
Publisher DOI
https://doi.org/10.5683/SP3/PW1ZZP
Rights URI
http://creativecommons.org/licenses/by/4.0
Country
Canada; Canada; Canada; Canada; Canada; Canada; Canada; Canada; Canada; United States; United States; Curaçao; Curaçao; Curaçao; Curaçao; Curaçao
Aggregated Source Repository
Dataverse

Item Media

Item Citations and Data

License

CC-BY 4.0