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Data from: Acid secretion by the boring organ of the burrowing giant clam, Tridacna crocea Hill, Richard W.; Armstrong, Eric J.; Inaba, Kazuo; Morita, Masaya; Tresguerres, Martin; Stillman, Jonathon H.; Roa, Jinae N.; Kwan, Garfield T.
Description
<b>Abstract</b><br/>The giant clam Tridacna crocea, native to Indo-Pacific coral reefs, is noted for its unique ability to bore fully into coral rock and is a major agent of reef bioerosion. However, T. crocea’s mechanism of boring has remained a mystery despite decades of research. By exploiting a new, two-dimensional pH-sensing technology and manipulating clams to press their presumptive boring tissue (the pedal mantle) against pH-sensing foils, we show that this tissue lowers the pH of surfaces it contacts by more than 2 pH units below seawater pH day and night. Acid secretion is likely mediated by vacuolar-type H<sup>+</sup>-ATPase, which we demonstrate (by immunofluorescence) is abundant in the pedal mantle outer epithelium. Our discovery of acid secretion solves this decades-old mystery and reveals that, during bioerosion, T. crocea can liberate reef constituents directly to the soluble phase, rather than producing sediment alone as earlier assumed.; <b>Usage notes</b><br /><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00001</h4><div class="o-metadata__file-description">Individual ID: Clam 1 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00006</h4><div class="o-metadata__file-description">Individual ID: Clam 5 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00011</h4><div class="o-metadata__file-description">Individual ID: Clam 3 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00013</h4><div class="o-metadata__file-description">Individual ID: Clam 6 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00018</h4><div class="o-metadata__file-description">Individual ID: Clam 7 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00021</h4><div class="o-metadata__file-description">Individual ID: Clam 8 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00026</h4><div class="o-metadata__file-description">Individual ID: Clam 1 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00034</h4><div class="o-metadata__file-description">Individual ID: Clam 5 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00040</h4><div class="o-metadata__file-description">Individual ID: Clam 3 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00042</h4><div class="o-metadata__file-description">Individual ID: Clam 6 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00044</h4><div class="o-metadata__file-description">Individual ID: Clam 7 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00049</h4><div class="o-metadata__file-description">Individual ID: Clam 8 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00031</h4><div class="o-metadata__file-description">Individual ID: Clam 4 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00076</h4><div class="o-metadata__file-description">Individual ID: Clam 4 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00059</h4><div class="o-metadata__file-description">Individual ID: Clam 2 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00061</h4><div class="o-metadata__file-description">Individual ID: Clam 9 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00083</h4><div class="o-metadata__file-description">Individual ID: Clam 9 (Night) ; Time: 11 March 2017 22:24</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00088</h4><div class="o-metadata__file-description">Individual ID: Clam 2 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div>
Item Metadata
Title |
Data from: Acid secretion by the boring organ of the burrowing giant clam, Tridacna crocea
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Creator | |
Date Issued |
2021-05-19
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Description |
<b>Abstract</b><br/>The giant clam Tridacna crocea, native to Indo-Pacific coral reefs, is noted for its unique ability to bore fully into coral rock and is a major agent of reef bioerosion. However, T. crocea’s mechanism of boring has remained a mystery despite decades of research. By exploiting a new, two-dimensional pH-sensing technology and manipulating clams to press their presumptive boring tissue (the pedal mantle) against pH-sensing foils, we show that this tissue lowers the pH of surfaces it contacts by more than 2 pH units below seawater pH day and night. Acid secretion is likely mediated by vacuolar-type H<sup>+</sup>-ATPase, which we demonstrate (by immunofluorescence) is abundant in the pedal mantle outer epithelium. Our discovery of acid secretion solves this decades-old mystery and reveals that, during bioerosion, T. crocea can liberate reef constituents directly to the soluble phase, rather than producing sediment alone as earlier assumed.; <b>Usage notes</b><br /><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00001</h4><div class="o-metadata__file-description">Individual ID: Clam 1 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00006</h4><div class="o-metadata__file-description">Individual ID: Clam 5 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00011</h4><div class="o-metadata__file-description">Individual ID: Clam 3 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00013</h4><div class="o-metadata__file-description">Individual ID: Clam 6 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00018</h4><div class="o-metadata__file-description">Individual ID: Clam 7 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00021</h4><div class="o-metadata__file-description">Individual ID: Clam 8 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00026</h4><div class="o-metadata__file-description">Individual ID: Clam 1 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00034</h4><div class="o-metadata__file-description">Individual ID: Clam 5 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00040</h4><div class="o-metadata__file-description">Individual ID: Clam 3 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00042</h4><div class="o-metadata__file-description">Individual ID: Clam 6 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00044</h4><div class="o-metadata__file-description">Individual ID: Clam 7 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00049</h4><div class="o-metadata__file-description">Individual ID: Clam 8 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00031</h4><div class="o-metadata__file-description">Individual ID: Clam 4 (Day) ; Time: 10 March 2017 14:40</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00076</h4><div class="o-metadata__file-description">Individual ID: Clam 4 (Night) ; Time: 10 March 2017 20:45</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00059</h4><div class="o-metadata__file-description">Individual ID: Clam 2 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00061</h4><div class="o-metadata__file-description">Individual ID: Clam 9 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00083</h4><div class="o-metadata__file-description">Individual ID: Clam 9 (Night) ; Time: 11 March 2017 22:24</div><div class="o-metadata__file-name"></div></div><div class="o-metadata__file-usage-entry"><h4 class="o-heading__level3-file-title">ME_ST_XX_00088</h4><div class="o-metadata__file-description">Individual ID: Clam 2 (Day) ; Time: 11 March 2017 14:06</div><div class="o-metadata__file-name"></div></div>
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Subject | |
Type | |
Notes |
Dryad version number: 1</p> Version status: submitted</p> Dryad curation status: Published</p> Sharing link: https://datadryad.org/stash/share/GRq_5HhgWPHiARfysb85gZMtdxPKC9qn41ygs7lJrAM</p> Storage size: 29965490</p> Visibility: public</p> |
Date Available |
2020-06-24
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Provider |
University of British Columbia Library
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License |
CC0 1.0
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DOI |
10.14288/1.0397982
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URI | |
Publisher DOI | |
Rights URI | |
Aggregated Source Repository |
Dataverse
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Licence
CC0 1.0