- Library Home /
- Search Collections /
- Open Collections /
- Browse Collections /
- UBC Research Data /
- Data from: Partitioning genetic and species diversity...
Open Collections
UBC Research Data
Data from: Partitioning genetic and species diversity refines our understanding of species-genetic diversity relationships Pfeiffer, Vera W; Ford, Brett M; Housset, Johann; McCombs, Audrey; Blanco-Pastor, José L; Gouin, Nicolas; Manel, Stephanie; Bertin, Angéline
Description
Abstract
Illuminating the origin of species-genetic diversity correlations (SGDCs) is a challenging task that has sparked a lot of interest. Genetic and species diversity are comprised by components that respond differently to the same ecological processes. Thus, it can be useful to partition species and genetic diversity into their different components to infer the mechanisms behind SGDCs. In this study, we applied such an approach using a high-elevation Andean wetland system, where previous evidence identified neutral processes as major determinants of the strong and positive covariation between plant species richness and AFLP genetic diversity of the common sedge Carex gayana. To tease apart putative neutral and non-neutral genetic variation of C. gayana, we identified loci putatively under selection from a dataset of 1709 SNPs produced using restriction site-associated DNA sequencing (RAD-seq). Significant and positive relationships between local estimates of genetic and species diversities (α-SGDCs) were only found with the putatively neutral loci datasets and with species richness, confirming that neutral processes were primarily driving the correlations and that the involved processes differentially influenced local species diversity components (i.e. richness and evenness). In contrast, SGDCs based on genetic and community dissimilarities (-SGDCs) were only significant with the putative non-neutral datasets. This suggests that selective processes influencing C. gayana genetic diversity were involved in the detected correlations. Together, our results demonstrate that analyzing distinct components of genetic and species diversity simultaneously is useful to determine the mechanisms behind species-genetic diversity relationships.
Usage notes
Carex guyana SNP dataset, Andean wetland plant community dataset, and environmental data for species genetic diversity correlation study
Item Metadata
| Title |
Data from: Partitioning genetic and species diversity refines our understanding of species-genetic diversity relationships
|
| Creator | |
| Date Issued |
2021-05-19
|
| Description |
Abstract
Illuminating the origin of species-genetic diversity correlations (SGDCs) is a challenging task that has sparked a lot of interest. Genetic and species diversity are comprised by components that respond differently to the same ecological processes. Thus, it can be useful to partition species and genetic diversity into their different components to infer the mechanisms behind SGDCs. In this study, we applied such an approach using a high-elevation Andean wetland system, where previous evidence identified neutral processes as major determinants of the strong and positive covariation between plant species richness and AFLP genetic diversity of the common sedge Carex gayana. To tease apart putative neutral and non-neutral genetic variation of C. gayana, we identified loci putatively under selection from a dataset of 1709 SNPs produced using restriction site-associated DNA sequencing (RAD-seq). Significant and positive relationships between local estimates of genetic and species diversities (α-SGDCs) were only found with the putatively neutral loci datasets and with species richness, confirming that neutral processes were primarily driving the correlations and that the involved processes differentially influenced local species diversity components (i.e. richness and evenness). In contrast, SGDCs based on genetic and community dissimilarities (-SGDCs) were only significant with the putative non-neutral datasets. This suggests that selective processes influencing C. gayana genetic diversity were involved in the detected correlations. Together, our results demonstrate that analyzing distinct components of genetic and species diversity simultaneously is useful to determine the mechanisms behind species-genetic diversity relationships.; Usage notes Carex guyana SNP dataset, Andean wetland plant community dataset, and environmental data for species genetic diversity correlation study |
| Subject | |
| Geographic Location | |
| Type | |
| Notes |
Dryad version number: 1 Version status: submitted Dryad curation status: Published Sharing link: https://datadryad.org/stash/share/hOUpJb2Tkih6uSpleLRocYtdoOapKhnP9XS66WzeUQg</p> Storage size: 3134003 Visibility: public |
| Date Available |
2020-06-24
|
| Provider |
University of British Columbia Library
|
| License |
CC0 1.0
|
| DOI |
10.14288/1.0397674
|
| URI | |
| Publisher DOI | |
| Rights URI | |
| Aggregated Source Repository |
Dataverse
|
Item Media
Item Citations and Data
License
CC0 1.0