UBC Research Data

transORF Foster, Leonard

Description

A tool that takes a FASTA nucleotide file and predicts all open reading frames in all six translation frames. The output is a FASTA amino acid file. This tool is useful for creating a protein library for database searching (where a good prediction is unavailable) if you don’t want to (or can’t) search your MS/MS spectra against a nucleotide library.

Item Media

Item Citations and Data

Licence

This work is licensed under a Creative Commons Attribution 4.0 International License.

Usage Statistics