BIRS Workshop Lecture Videos

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BIRS Workshop Lecture Videos

CORTEX seq-FISH: clustering Coullomb, Alexis


Alexis Coullomb is a member of Vera Pancaldi's Lab at Cancer Research Centre of Toulouse, INSERM, France, Alexis Coullomb will present analysis in which addressed the questions: * Can scRNA-seq data be overlaid onto seqFISH for resolution enhancement * What is the minimal number of genes needed for data integration Alexis Coullomb was also interested in how could we detect specific spatial areas given the seqFISH gene expression data and by reconstruction the spatial network of cells. Code is available at:

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