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Gaussian Network models for Topological Polymers

Banff International Research Station for Mathematical Innovation and Discovery

Very recently, new advances in synthetic chemistry have enabled the synthesis of polymers with more graph types-- polymers with the structure of a tetrahedron, for instance, or a theta-curve, or a complete bipartite graph. So many new polymer topologies are being synthesized at such a rapid rate over the past few years (2016--present) that chemists describe it as a "Cambrian explosion" of topological polymers. The new polymers seem to have fascinating and previously unseen properties, which hold out promise in technology, energy, and medicine. In this talk, we present a model for these topological polymers as Gaussian random walks whose overall topology is constrained by any (arbitrary) graph G. It turns out to be the case that understanding the constraints comes down to a mixture of topology and linear algebra, and that the model ties into some rich mathematics connecting graph theory and chemistry from the 1990's. We'll present an algorithm for sampling configurations of these polymers, as well as some theoretical results. In particular, we'll give a nice formula for the expected radius of gyration of a topological polymer in terms of the eigenvalues of the graph Laplacian of the underlying graph G. This talk represents joint work with Clayton Shonkwiler (mathematics, Colorado State University), Tetsuo Deguchi, and Erica Uehara (physics, Ochanomizu University) which was funded by the Simons Foundation.

Mathematics; Biology and other natural sciences; Manifolds and cell complexes; Mathematical biology

video/mp4

Author affiliation: University of Georgia

2019-09-22

Attribution-NonCommercial-NoDerivatives 4.0 International

http://hdl.handle.net/2429/71718

Unreviewed

http://creativecommons.org/licenses/by-nc-nd/4.0/